Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Shc4Q6S5L9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19■□□□□ 0.63
Shc4Q6S5L9 Serp2-204ENSMUST00000228055 705 ntBASIC19■□□□□ 0.63
Shc4Q6S5L9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shc4Q6S5L9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shc4Q6S5L9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Shc4Q6S5L9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.98■□□□□ 0.63
Shc4Q6S5L9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.98■□□□□ 0.63
Shc4Q6S5L9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Shc4Q6S5L9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shc4Q6S5L9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Shc4Q6S5L9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Shc4Q6S5L9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Shc4Q6S5L9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shc4Q6S5L9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Shc4Q6S5L9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Shc4Q6S5L9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shc4Q6S5L9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shc4Q6S5L9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Shc4Q6S5L9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Shc4Q6S5L9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shc4Q6S5L9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shc4Q6S5L9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shc4Q6S5L9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.94■□□□□ 0.62
Shc4Q6S5L9 Gm7143-201ENSMUST00000222811 859 ntBASIC18.94■□□□□ 0.62
Shc4Q6S5L9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shc4Q6S5L9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Shc4Q6S5L9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Shc4Q6S5L9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shc4Q6S5L9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Shc4Q6S5L9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shc4Q6S5L9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Shc4Q6S5L9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shc4Q6S5L9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shc4Q6S5L9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Shc4Q6S5L9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.92■□□□□ 0.62
Shc4Q6S5L9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.92■□□□□ 0.62
Shc4Q6S5L9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
Shc4Q6S5L9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.92■□□□□ 0.62
Shc4Q6S5L9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
Shc4Q6S5L9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shc4Q6S5L9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Shc4Q6S5L9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Shc4Q6S5L9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Shc4Q6S5L9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Shc4Q6S5L9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Shc4Q6S5L9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms