Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Traf4Q61382 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.87■□□□□ 0.45
Traf4Q61382 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.87■□□□□ 0.45
Traf4Q61382 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.87■□□□□ 0.45
Traf4Q61382 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf4Q61382 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Traf4Q61382 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Traf4Q61382 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf4Q61382 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Traf4Q61382 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf4Q61382 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf4Q61382 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf4Q61382 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf4Q61382 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf4Q61382 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf4Q61382 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Traf4Q61382 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Traf4Q61382 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf4Q61382 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf4Q61382 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf4Q61382 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Traf4Q61382 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.85■□□□□ 0.45
Traf4Q61382 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Traf4Q61382 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Traf4Q61382 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf4Q61382 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf4Q61382 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.84■□□□□ 0.45
Traf4Q61382 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Traf4Q61382 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf4Q61382 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.84■□□□□ 0.45
Traf4Q61382 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Traf4Q61382 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.84■□□□□ 0.45
Traf4Q61382 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.84■□□□□ 0.45
Traf4Q61382 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf4Q61382 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf4Q61382 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Traf4Q61382 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Traf4Q61382 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.84■□□□□ 0.45
Traf4Q61382 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Traf4Q61382 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Traf4Q61382 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Traf4Q61382 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Traf4Q61382 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Traf4Q61382 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.83■□□□□ 0.44
Traf4Q61382 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Traf4Q61382 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Traf4Q61382 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Traf4Q61382 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Traf4Q61382 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Traf4Q61382 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Traf4Q61382 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Traf4Q61382 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Traf4Q61382 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Traf4Q61382 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.82■□□□□ 0.44
Traf4Q61382 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.82■□□□□ 0.44
Traf4Q61382 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.82■□□□□ 0.44
Traf4Q61382 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Traf4Q61382 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Traf4Q61382 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Traf4Q61382 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Traf4Q61382 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.81■□□□□ 0.44
Traf4Q61382 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Traf4Q61382 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Traf4Q61382 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Traf4Q61382 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Traf4Q61382 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Traf4Q61382 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Traf4Q61382 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Traf4Q61382 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Traf4Q61382 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Traf4Q61382 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Traf4Q61382 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Traf4Q61382 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Traf4Q61382 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Traf4Q61382 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.79■□□□□ 0.44
Traf4Q61382 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Traf4Q61382 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Traf4Q61382 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Traf4Q61382 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.79■□□□□ 0.44
Traf4Q61382 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Traf4Q61382 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Traf4Q61382 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Traf4Q61382 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Traf4Q61382 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Traf4Q61382 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Traf4Q61382 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.78■□□□□ 0.44
Traf4Q61382 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.78■□□□□ 0.44
Traf4Q61382 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Traf4Q61382 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
Traf4Q61382 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms