Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a1Q61245 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a1Q61245 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a1Q61245 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Col11a1Q61245 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.37■■□□□ 1.33
Col11a1Q61245 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Col11a1Q61245 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.37■■□□□ 1.33
Col11a1Q61245 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a1Q61245 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.37■■□□□ 1.33
Col11a1Q61245 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a1Q61245 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a1Q61245 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a1Q61245 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a1Q61245 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a1Q61245 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Col11a1Q61245 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a1Q61245 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC23.36■■□□□ 1.33
Col11a1Q61245 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a1Q61245 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a1Q61245 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a1Q61245 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a1Q61245 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.35■■□□□ 1.33
Col11a1Q61245 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a1Q61245 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a1Q61245 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col11a1Q61245 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col11a1Q61245 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Col11a1Q61245 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Col11a1Q61245 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col11a1Q61245 Gm10602-201ENSMUST00000098239 609 ntBASIC23.34■■□□□ 1.33
Col11a1Q61245 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col11a1Q61245 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Col11a1Q61245 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col11a1Q61245 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col11a1Q61245 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col11a1Q61245 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.33■■□□□ 1.32
Col11a1Q61245 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
Col11a1Q61245 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.33■■□□□ 1.32
Col11a1Q61245 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.33■■□□□ 1.32
Col11a1Q61245 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.33■■□□□ 1.32
Col11a1Q61245 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Col11a1Q61245 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a1Q61245 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.32■■□□□ 1.32
Col11a1Q61245 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a1Q61245 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a1Q61245 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Col11a1Q61245 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.32■■□□□ 1.32
Col11a1Q61245 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.32■■□□□ 1.32
Col11a1Q61245 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Gm9988-201ENSMUST00000069786 435 ntBASIC23.31■■□□□ 1.32
Col11a1Q61245 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a1Q61245 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a1Q61245 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Col11a1Q61245 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a1Q61245 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Col11a1Q61245 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Col11a1Q61245 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a1Q61245 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a1Q61245 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a1Q61245 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a1Q61245 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a1Q61245 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a1Q61245 Gm10653-202ENSMUST00000139570 835 ntBASIC23.29■■□□□ 1.32
Col11a1Q61245 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a1Q61245 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.29■■□□□ 1.32
Col11a1Q61245 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.28■■□□□ 1.32
Col11a1Q61245 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a1Q61245 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a1Q61245 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a1Q61245 Gm13234-201ENSMUST00000120010 747 ntBASIC23.28■■□□□ 1.32
Col11a1Q61245 Gm12441-201ENSMUST00000121806 588 ntBASIC23.28■■□□□ 1.32
Col11a1Q61245 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a1Q61245 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.28■■□□□ 1.32
Col11a1Q61245 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a1Q61245 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a1Q61245 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.27■■□□□ 1.32
Col11a1Q61245 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Col11a1Q61245 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.27■■□□□ 1.32
Col11a1Q61245 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Col11a1Q61245 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col11a1Q61245 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Col11a1Q61245 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col11a1Q61245 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col11a1Q61245 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.26■■□□□ 1.31
Col11a1Q61245 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.26■■□□□ 1.31
Col11a1Q61245 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col11a1Q61245 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Col11a1Q61245 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Col11a1Q61245 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Col11a1Q61245 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.26■■□□□ 1.31
Col11a1Q61245 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
Col11a1Q61245 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a1Q61245 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms