Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfaip3Q60769 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfaip3Q60769 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfaip3Q60769 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfaip3Q60769 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.08■□□□□ 0.64
Tnfaip3Q60769 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfaip3Q60769 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfaip3Q60769 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfaip3Q60769 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfaip3Q60769 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Tnfaip3Q60769 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfaip3Q60769 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Tnfaip3Q60769 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.06■□□□□ 0.64
Tnfaip3Q60769 Gm43530-201ENSMUST00000195920 274 ntBASIC19.06■□□□□ 0.64
Tnfaip3Q60769 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfaip3Q60769 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Tnfaip3Q60769 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Gm15039-201ENSMUST00000118914 875 ntBASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tnfaip3Q60769 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfaip3Q60769 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Gm27454-201ENSMUST00000185090 204 ntBASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfaip3Q60769 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfaip3Q60769 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfaip3Q60769 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfaip3Q60769 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfaip3Q60769 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfaip3Q60769 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Tnfaip3Q60769 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.01■□□□□ 0.63
Tnfaip3Q60769 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfaip3Q60769 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tnfaip3Q60769 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfaip3Q60769 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms