Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr3Q5U430 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr3Q5U430 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Ubr3Q5U430 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr3Q5U430 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr3Q5U430 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr3Q5U430 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr3Q5U430 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Ubr3Q5U430 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ubr3Q5U430 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr3Q5U430 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr3Q5U430 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr3Q5U430 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC25.35■■□□□ 1.65
Ubr3Q5U430 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ubr3Q5U430 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Ubr3Q5U430 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ubr3Q5U430 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ubr3Q5U430 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ubr3Q5U430 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Ubr3Q5U430 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.34■■□□□ 1.65
Ubr3Q5U430 Gm14281-201ENSMUST00000121700 1294 ntBASIC25.34■■□□□ 1.65
Ubr3Q5U430 Gm42778-201ENSMUST00000199644 553 ntBASIC25.34■■□□□ 1.65
Ubr3Q5U430 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ubr3Q5U430 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC25.33■■□□□ 1.65
Ubr3Q5U430 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ubr3Q5U430 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC25.33■■□□□ 1.65
Ubr3Q5U430 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ubr3Q5U430 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Ubr3Q5U430 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr3Q5U430 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC25.32■■□□□ 1.64
Ubr3Q5U430 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC25.32■■□□□ 1.64
Ubr3Q5U430 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ubr3Q5U430 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Ubr3Q5U430 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Ubr3Q5U430 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.32■■□□□ 1.64
Ubr3Q5U430 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ubr3Q5U430 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Ubr3Q5U430 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr3Q5U430 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr3Q5U430 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr3Q5U430 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC25.29■■□□□ 1.64
Ubr3Q5U430 Nespas-201ENSMUST00000143738 1083 ntBASIC25.29■■□□□ 1.64
Ubr3Q5U430 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr3Q5U430 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ubr3Q5U430 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC25.28■■□□□ 1.64
Ubr3Q5U430 Ap3s1-204ENSMUST00000225520 957 ntBASIC25.28■■□□□ 1.64
Ubr3Q5U430 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr3Q5U430 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr3Q5U430 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr3Q5U430 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Ubr3Q5U430 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC25.28■■□□□ 1.64
Ubr3Q5U430 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Ubr3Q5U430 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Ubr3Q5U430 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Ubr3Q5U430 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ubr3Q5U430 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ubr3Q5U430 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC25.27■■□□□ 1.64
Ubr3Q5U430 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Ubr3Q5U430 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Ubr3Q5U430 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr3Q5U430 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr3Q5U430 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Ubr3Q5U430 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
Ubr3Q5U430 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ubr3Q5U430 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr3Q5U430 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr3Q5U430 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC25.25■■□□□ 1.63
Ubr3Q5U430 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr3Q5U430 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr3Q5U430 Gm10602-201ENSMUST00000098239 609 ntBASIC25.25■■□□□ 1.63
Ubr3Q5U430 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr3Q5U430 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ubr3Q5U430 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ubr3Q5U430 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ubr3Q5U430 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC25.24■■□□□ 1.63
Ubr3Q5U430 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC25.24■■□□□ 1.63
Ubr3Q5U430 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC25.24■■□□□ 1.63
Ubr3Q5U430 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC25.23■■□□□ 1.63
Ubr3Q5U430 Gm13234-201ENSMUST00000120010 747 ntBASIC25.23■■□□□ 1.63
Ubr3Q5U430 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Ubr3Q5U430 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
Ubr3Q5U430 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms