Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8d-2Q5R1B6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8d-2Q5R1B6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8d-2Q5R1B6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.04■□□□□ 0.8
Trav8d-2Q5R1B6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8d-2Q5R1B6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trav8d-2Q5R1B6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8d-2Q5R1B6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 Gm12933-201ENSMUST00000120203 872 ntBASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trav8d-2Q5R1B6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav8d-2Q5R1B6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trav8d-2Q5R1B6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav8d-2Q5R1B6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav8d-2Q5R1B6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav8d-2Q5R1B6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trav8d-2Q5R1B6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8d-2Q5R1B6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Trav8d-2Q5R1B6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8d-2Q5R1B6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8d-2Q5R1B6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8d-2Q5R1B6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8d-2Q5R1B6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8d-2Q5R1B6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav8d-2Q5R1B6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav8d-2Q5R1B6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav8d-2Q5R1B6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav8d-2Q5R1B6 Gm9988-201ENSMUST00000069786 435 ntBASIC19.98■□□□□ 0.79
Trav8d-2Q5R1B6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
Trav8d-2Q5R1B6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.98■□□□□ 0.79
Trav8d-2Q5R1B6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav8d-2Q5R1B6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav8d-2Q5R1B6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav8d-2Q5R1B6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav8d-2Q5R1B6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.95■□□□□ 0.78
Trav8d-2Q5R1B6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav8d-2Q5R1B6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav8d-2Q5R1B6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms