Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf223Q3UV31 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf223Q3UV31 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf223Q3UV31 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.8■□□□□ 0.76
Rnf223Q3UV31 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Rnf223Q3UV31 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf223Q3UV31 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.8■□□□□ 0.76
Rnf223Q3UV31 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf223Q3UV31 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.8■□□□□ 0.76
Rnf223Q3UV31 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf223Q3UV31 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf223Q3UV31 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf223Q3UV31 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Rnf223Q3UV31 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf223Q3UV31 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.77■□□□□ 0.76
Rnf223Q3UV31 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rnf223Q3UV31 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf223Q3UV31 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf223Q3UV31 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf223Q3UV31 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf223Q3UV31 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Gm12251-201ENSMUST00000117893 792 ntBASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf223Q3UV31 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf223Q3UV31 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf223Q3UV31 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf223Q3UV31 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf223Q3UV31 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf223Q3UV31 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rnf223Q3UV31 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf223Q3UV31 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf223Q3UV31 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Gm8493-201ENSMUST00000196881 489 ntBASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf223Q3UV31 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Rnf223Q3UV31 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms