Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.45■□□□□ 0.86
ThraP63058 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.45■□□□□ 0.86
ThraP63058 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ThraP63058 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ThraP63058 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.45■□□□□ 0.86
ThraP63058 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.45■□□□□ 0.86
ThraP63058 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ThraP63058 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.45■□□□□ 0.86
ThraP63058 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ThraP63058 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.44■□□□□ 0.86
ThraP63058 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.44■□□□□ 0.86
ThraP63058 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ThraP63058 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ThraP63058 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ThraP63058 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.43■□□□□ 0.86
ThraP63058 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ThraP63058 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ThraP63058 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
ThraP63058 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ThraP63058 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
ThraP63058 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.42■□□□□ 0.86
ThraP63058 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ThraP63058 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ThraP63058 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ThraP63058 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ThraP63058 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
ThraP63058 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.41■□□□□ 0.86
ThraP63058 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.41■□□□□ 0.86
ThraP63058 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ThraP63058 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ThraP63058 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ThraP63058 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ThraP63058 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ThraP63058 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ThraP63058 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ThraP63058 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.4■□□□□ 0.86
ThraP63058 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ThraP63058 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ThraP63058 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ThraP63058 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ThraP63058 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ThraP63058 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ThraP63058 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ThraP63058 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ThraP63058 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ThraP63058 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.39■□□□□ 0.85
ThraP63058 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ThraP63058 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ThraP63058 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ThraP63058 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ThraP63058 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.39■□□□□ 0.85
ThraP63058 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ThraP63058 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ThraP63058 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ThraP63058 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.38■□□□□ 0.85
ThraP63058 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.38■□□□□ 0.85
ThraP63058 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ThraP63058 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ThraP63058 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ThraP63058 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ThraP63058 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ThraP63058 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ThraP63058 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ThraP63058 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.37■□□□□ 0.85
ThraP63058 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.37■□□□□ 0.85
ThraP63058 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.37■□□□□ 0.85
ThraP63058 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.37■□□□□ 0.85
ThraP63058 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.37■□□□□ 0.85
ThraP63058 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ThraP63058 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ThraP63058 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ThraP63058 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ThraP63058 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ThraP63058 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ThraP63058 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
ThraP63058 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.36■□□□□ 0.85
ThraP63058 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.36■□□□□ 0.85
ThraP63058 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ThraP63058 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.36■□□□□ 0.85
ThraP63058 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.36■□□□□ 0.85
ThraP63058 Golgb1-201ENSMUST00000023534 498 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms