Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm18671-201ENSMUST00000214826 683 ntBASIC19.95■□□□□ 0.78
Limk1P53668 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Limk1P53668 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Limk1P53668 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limk1P53668 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limk1P53668 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limk1P53668 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limk1P53668 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limk1P53668 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.94■□□□□ 0.78
Limk1P53668 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Limk1P53668 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Limk1P53668 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.94■□□□□ 0.78
Limk1P53668 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Limk1P53668 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Limk1P53668 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Limk1P53668 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Limk1P53668 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Limk1P53668 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Limk1P53668 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.93■□□□□ 0.78
Limk1P53668 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Limk1P53668 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.93■□□□□ 0.78
Limk1P53668 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Limk1P53668 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Limk1P53668 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.93■□□□□ 0.78
Limk1P53668 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limk1P53668 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.92■□□□□ 0.78
Limk1P53668 Gm7143-201ENSMUST00000222811 859 ntBASIC19.92■□□□□ 0.78
Limk1P53668 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limk1P53668 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.92■□□□□ 0.78
Limk1P53668 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Limk1P53668 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.91■□□□□ 0.78
Limk1P53668 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.91■□□□□ 0.78
Limk1P53668 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Limk1P53668 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Limk1P53668 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Limk1P53668 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.9■□□□□ 0.78
Limk1P53668 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Limk1P53668 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.9■□□□□ 0.78
Limk1P53668 AV356131-201ENSMUST00000206201 750 ntBASIC19.9■□□□□ 0.78
Limk1P53668 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Limk1P53668 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Limk1P53668 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Limk1P53668 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk1P53668 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk1P53668 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk1P53668 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Limk1P53668 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Limk1P53668 Gm10033-202ENSMUST00000211874 928 ntBASIC19.89■□□□□ 0.77
Limk1P53668 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.89■□□□□ 0.77
Limk1P53668 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Limk1P53668 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Limk1P53668 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Limk1P53668 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.88■□□□□ 0.77
Limk1P53668 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.88■□□□□ 0.77
Limk1P53668 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Limk1P53668 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk1P53668 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.87■□□□□ 0.77
Limk1P53668 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk1P53668 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk1P53668 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Limk1P53668 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Limk1P53668 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Limk1P53668 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Limk1P53668 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.86■□□□□ 0.77
Limk1P53668 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Limk1P53668 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
Limk1P53668 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.86■□□□□ 0.77
Limk1P53668 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
Limk1P53668 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Limk1P53668 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Limk1P53668 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Limk1P53668 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Limk1P53668 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk1P53668 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Limk1P53668 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.85■□□□□ 0.77
Limk1P53668 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Limk1P53668 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Limk1P53668 Gm40848-201ENSMUST00000221998 324 ntBASIC19.85■□□□□ 0.77
Limk1P53668 Gm10602-201ENSMUST00000098239 609 ntBASIC19.85■□□□□ 0.77
Limk1P53668 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk1P53668 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Limk1P53668 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Limk1P53668 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk1P53668 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk1P53668 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Limk1P53668 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Limk1P53668 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk1P53668 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Limk1P53668 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk1P53668 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Limk1P53668 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms