Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SftpbP50405 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SftpbP50405 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SftpbP50405 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SftpbP50405 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SftpbP50405 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SftpbP50405 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SftpbP50405 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SftpbP50405 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.77■□□□□ 0.92
SftpbP50405 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SftpbP50405 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.77■□□□□ 0.92
SftpbP50405 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SftpbP50405 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SftpbP50405 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
SftpbP50405 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SftpbP50405 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
SftpbP50405 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SftpbP50405 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SftpbP50405 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SftpbP50405 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.76■□□□□ 0.91
SftpbP50405 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SftpbP50405 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.76■□□□□ 0.91
SftpbP50405 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SftpbP50405 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SftpbP50405 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SftpbP50405 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SftpbP50405 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SftpbP50405 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SftpbP50405 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SftpbP50405 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.75■□□□□ 0.91
SftpbP50405 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SftpbP50405 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.75■□□□□ 0.91
SftpbP50405 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
SftpbP50405 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SftpbP50405 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SftpbP50405 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SftpbP50405 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SftpbP50405 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.75■□□□□ 0.91
SftpbP50405 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SftpbP50405 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SftpbP50405 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SftpbP50405 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SftpbP50405 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SftpbP50405 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SftpbP50405 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SftpbP50405 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SftpbP50405 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.73■□□□□ 0.91
SftpbP50405 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.73■□□□□ 0.91
SftpbP50405 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SftpbP50405 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SftpbP50405 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SftpbP50405 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SftpbP50405 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SftpbP50405 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SftpbP50405 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SftpbP50405 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SftpbP50405 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SftpbP50405 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SftpbP50405 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SftpbP50405 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.71■□□□□ 0.91
SftpbP50405 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.71■□□□□ 0.91
SftpbP50405 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.71■□□□□ 0.91
SftpbP50405 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SftpbP50405 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.71■□□□□ 0.91
SftpbP50405 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SftpbP50405 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.7■□□□□ 0.91
SftpbP50405 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SftpbP50405 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SftpbP50405 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SftpbP50405 Gm13238-201ENSMUST00000117655 780 ntBASIC20.7■□□□□ 0.9
SftpbP50405 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SftpbP50405 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SftpbP50405 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SftpbP50405 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SftpbP50405 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SftpbP50405 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SftpbP50405 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SftpbP50405 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.69■□□□□ 0.9
SftpbP50405 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms