Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Xcl1P47993 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Xcl1P47993 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xcl1P47993 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC13.33□□□□□ -0.28
Xcl1P47993 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Xcl1P47993 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Xcl1P47993 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Xcl1P47993 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC13.32□□□□□ -0.28
Xcl1P47993 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Gm17082-201ENSMUST00000166043 1091 ntBASIC13.32□□□□□ -0.28
Xcl1P47993 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Xcl1P47993 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Xcl1P47993 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Xcl1P47993 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.31□□□□□ -0.28
Xcl1P47993 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Xcl1P47993 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Xcl1P47993 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC13.3□□□□□ -0.28
Xcl1P47993 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Xcl1P47993 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC13.3□□□□□ -0.28
Xcl1P47993 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC13.3□□□□□ -0.28
Xcl1P47993 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Xcl1P47993 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Xcl1P47993 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Xcl1P47993 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Xcl1P47993 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Xcl1P47993 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Xcl1P47993 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Xcl1P47993 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.29□□□□□ -0.28
Xcl1P47993 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Xcl1P47993 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.29□□□□□ -0.28
Xcl1P47993 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Xcl1P47993 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Xcl1P47993 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Xcl1P47993 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Xcl1P47993 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Xcl1P47993 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Xcl1P47993 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Xcl1P47993 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Xcl1P47993 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Xcl1P47993 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Xcl1P47993 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms