Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox18P43680 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox18P43680 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox18P43680 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox18P43680 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox18P43680 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox18P43680 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox18P43680 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox18P43680 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox18P43680 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sox18P43680 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox18P43680 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.5■□□□□ 0.71
Sox18P43680 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.5■□□□□ 0.71
Sox18P43680 Smad6-203ENSMUST00000179458 273 ntBASIC19.5■□□□□ 0.71
Sox18P43680 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.5■□□□□ 0.71
Sox18P43680 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox18P43680 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox18P43680 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox18P43680 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox18P43680 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.5■□□□□ 0.71
Sox18P43680 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox18P43680 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.49■□□□□ 0.71
Sox18P43680 Gm42778-201ENSMUST00000199644 553 ntBASIC19.49■□□□□ 0.71
Sox18P43680 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox18P43680 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sox18P43680 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sox18P43680 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.49■□□□□ 0.71
Sox18P43680 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox18P43680 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sox18P43680 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox18P43680 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox18P43680 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox18P43680 Nespas-201ENSMUST00000143738 1083 ntBASIC19.47■□□□□ 0.71
Sox18P43680 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox18P43680 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.47■□□□□ 0.71
Sox18P43680 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.47■□□□□ 0.71
Sox18P43680 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
Sox18P43680 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox18P43680 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.46■□□□□ 0.71
Sox18P43680 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sox18P43680 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox18P43680 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox18P43680 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.45■□□□□ 0.7
Sox18P43680 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox18P43680 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.45■□□□□ 0.7
Sox18P43680 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.45■□□□□ 0.7
Sox18P43680 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.45■□□□□ 0.7
Sox18P43680 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox18P43680 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox18P43680 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Sox18P43680 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.45■□□□□ 0.7
Sox18P43680 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox18P43680 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Sox18P43680 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox18P43680 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox18P43680 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.43■□□□□ 0.7
Sox18P43680 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sox18P43680 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.43■□□□□ 0.7
Sox18P43680 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox18P43680 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sox18P43680 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.42■□□□□ 0.7
Sox18P43680 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.42■□□□□ 0.7
Sox18P43680 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.42■□□□□ 0.7
Sox18P43680 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms