Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thbs1P35441 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thbs1P35441 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Thbs1P35441 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thbs1P35441 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Thbs1P35441 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Thbs1P35441 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.79■□□□□ 0.6
Thbs1P35441 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.79■□□□□ 0.6
Thbs1P35441 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.79■□□□□ 0.6
Thbs1P35441 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.79■□□□□ 0.6
Thbs1P35441 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Thbs1P35441 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Thbs1P35441 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thbs1P35441 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Thbs1P35441 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.78■□□□□ 0.6
Thbs1P35441 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.78■□□□□ 0.6
Thbs1P35441 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thbs1P35441 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.78■□□□□ 0.6
Thbs1P35441 Rps24-207ENSMUST00000224568 714 ntBASIC18.78■□□□□ 0.6
Thbs1P35441 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thbs1P35441 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Thbs1P35441 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Thbs1P35441 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thbs1P35441 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Thbs1P35441 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Thbs1P35441 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Gm7143-201ENSMUST00000222811 859 ntBASIC18.77■□□□□ 0.6
Thbs1P35441 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thbs1P35441 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Thbs1P35441 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Thbs1P35441 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Thbs1P35441 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thbs1P35441 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thbs1P35441 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thbs1P35441 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Thbs1P35441 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Thbs1P35441 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Thbs1P35441 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Thbs1P35441 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thbs1P35441 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.75■□□□□ 0.59
Thbs1P35441 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Gm15039-201ENSMUST00000118914 875 ntBASIC18.75■□□□□ 0.59
Thbs1P35441 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.75■□□□□ 0.59
Thbs1P35441 Gm15820-201ENSMUST00000201566 728 ntBASIC18.75■□□□□ 0.59
Thbs1P35441 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Thbs1P35441 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thbs1P35441 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Thbs1P35441 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.74■□□□□ 0.59
Thbs1P35441 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Thbs1P35441 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.73■□□□□ 0.59
Thbs1P35441 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.73■□□□□ 0.59
Thbs1P35441 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Thbs1P35441 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Thbs1P35441 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thbs1P35441 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thbs1P35441 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.72■□□□□ 0.59
Thbs1P35441 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.72■□□□□ 0.59
Thbs1P35441 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Thbs1P35441 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms