Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nfkb1P25799 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nfkb1P25799 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nfkb1P25799 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nfkb1P25799 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nfkb1P25799 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.9■□□□□ 0.94
Nfkb1P25799 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nfkb1P25799 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Nfkb1P25799 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.9■□□□□ 0.94
Nfkb1P25799 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nfkb1P25799 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nfkb1P25799 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nfkb1P25799 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.89■□□□□ 0.93
Nfkb1P25799 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.89■□□□□ 0.93
Nfkb1P25799 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.89■□□□□ 0.93
Nfkb1P25799 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nfkb1P25799 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Nfkb1P25799 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nfkb1P25799 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nfkb1P25799 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nfkb1P25799 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.89■□□□□ 0.93
Nfkb1P25799 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nfkb1P25799 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.88■□□□□ 0.93
Nfkb1P25799 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nfkb1P25799 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nfkb1P25799 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nfkb1P25799 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nfkb1P25799 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nfkb1P25799 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.88■□□□□ 0.93
Nfkb1P25799 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.88■□□□□ 0.93
Nfkb1P25799 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nfkb1P25799 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
Nfkb1P25799 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nfkb1P25799 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nfkb1P25799 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.87■□□□□ 0.93
Nfkb1P25799 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nfkb1P25799 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nfkb1P25799 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nfkb1P25799 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nfkb1P25799 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nfkb1P25799 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nfkb1P25799 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nfkb1P25799 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nfkb1P25799 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Nfkb1P25799 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nfkb1P25799 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nfkb1P25799 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.86■□□□□ 0.93
Nfkb1P25799 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nfkb1P25799 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Nfkb1P25799 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Nfkb1P25799 Gm43017-201ENSMUST00000198296 752 ntBASIC20.86■□□□□ 0.93
Nfkb1P25799 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Nfkb1P25799 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nfkb1P25799 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nfkb1P25799 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nfkb1P25799 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nfkb1P25799 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nfkb1P25799 Gm8493-201ENSMUST00000196881 489 ntBASIC20.85■□□□□ 0.93
Nfkb1P25799 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nfkb1P25799 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nfkb1P25799 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nfkb1P25799 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nfkb1P25799 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nfkb1P25799 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Nfkb1P25799 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nfkb1P25799 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.84■□□□□ 0.93
Nfkb1P25799 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nfkb1P25799 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nfkb1P25799 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.83■□□□□ 0.93
Nfkb1P25799 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.83■□□□□ 0.93
Nfkb1P25799 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nfkb1P25799 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nfkb1P25799 Gm12251-201ENSMUST00000117893 792 ntBASIC20.83■□□□□ 0.93
Nfkb1P25799 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.83■□□□□ 0.93
Nfkb1P25799 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Nfkb1P25799 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nfkb1P25799 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Nfkb1P25799 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nfkb1P25799 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.82■□□□□ 0.92
Nfkb1P25799 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nfkb1P25799 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nfkb1P25799 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nfkb1P25799 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nfkb1P25799 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nfkb1P25799 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Nfkb1P25799 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.82■□□□□ 0.92
Nfkb1P25799 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nfkb1P25799 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.81■□□□□ 0.92
Nfkb1P25799 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Nfkb1P25799 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.81■□□□□ 0.92
Nfkb1P25799 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nfkb1P25799 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms