Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Srp54P14576 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Srp54P14576 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Srp54P14576 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.95■□□□□ 0.78
Srp54P14576 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Srp54P14576 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Srp54P14576 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Srp54P14576 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Srp54P14576 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Srp54P14576 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.94■□□□□ 0.78
Srp54P14576 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.94■□□□□ 0.78
Srp54P14576 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.94■□□□□ 0.78
Srp54P14576 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Srp54P14576 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Srp54P14576 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Srp54P14576 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Srp54P14576 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Srp54P14576 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Srp54P14576 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Srp54P14576 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Srp54P14576 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Srp54P14576 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Srp54P14576 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Srp54P14576 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Srp54P14576 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Srp54P14576 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Srp54P14576 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Srp54P14576 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Srp54P14576 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Srp54P14576 Gm43530-201ENSMUST00000195920 274 ntBASIC19.91■□□□□ 0.78
Srp54P14576 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Srp54P14576 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.91■□□□□ 0.78
Srp54P14576 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.9■□□□□ 0.78
Srp54P14576 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Srp54P14576 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.9■□□□□ 0.78
Srp54P14576 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Srp54P14576 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Srp54P14576 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Srp54P14576 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Srp54P14576 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Srp54P14576 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Srp54P14576 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Srp54P14576 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Srp54P14576 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.89■□□□□ 0.77
Srp54P14576 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.89■□□□□ 0.77
Srp54P14576 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Srp54P14576 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.88■□□□□ 0.77
Srp54P14576 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srp54P14576 Mir7075-201ENSMUST00000184187 82 ntBASIC19.88■□□□□ 0.77
Srp54P14576 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srp54P14576 Gm6139-201ENSMUST00000079261 882 ntBASIC19.88■□□□□ 0.77
Srp54P14576 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Srp54P14576 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srp54P14576 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srp54P14576 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Srp54P14576 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srp54P14576 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srp54P14576 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srp54P14576 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Srp54P14576 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.87■□□□□ 0.77
Srp54P14576 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.87■□□□□ 0.77
Srp54P14576 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srp54P14576 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srp54P14576 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Srp54P14576 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srp54P14576 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Srp54P14576 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Srp54P14576 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Srp54P14576 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Srp54P14576 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Srp54P14576 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.86■□□□□ 0.77
Srp54P14576 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Srp54P14576 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Srp54P14576 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Srp54P14576 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.86■□□□□ 0.77
Srp54P14576 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Srp54P14576 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.85■□□□□ 0.77
Srp54P14576 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srp54P14576 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srp54P14576 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srp54P14576 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Srp54P14576 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srp54P14576 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.85■□□□□ 0.77
Srp54P14576 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srp54P14576 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.85■□□□□ 0.77
Srp54P14576 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Srp54P14576 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Srp54P14576 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Srp54P14576 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.84■□□□□ 0.77
Srp54P14576 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.84■□□□□ 0.77
Srp54P14576 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Srp54P14576 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms