Protein–RNA interactions for Protein: P09803

Cdh1, Cadherin-1, mousemouse

Predictions only

Length 884 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh1P09803 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh1P09803 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh1P09803 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.55■□□□□ 0.88
Cdh1P09803 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh1P09803 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh1P09803 Gm45417-201ENSMUST00000209533 758 ntBASIC20.55■□□□□ 0.88
Cdh1P09803 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh1P09803 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh1P09803 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdh1P09803 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdh1P09803 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cdh1P09803 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh1P09803 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdh1P09803 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh1P09803 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh1P09803 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh1P09803 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh1P09803 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh1P09803 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh1P09803 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdh1P09803 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh1P09803 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh1P09803 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh1P09803 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdh1P09803 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.53■□□□□ 0.88
Cdh1P09803 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdh1P09803 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cdh1P09803 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh1P09803 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.52■□□□□ 0.88
Cdh1P09803 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.52■□□□□ 0.88
Cdh1P09803 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh1P09803 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdh1P09803 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cdh1P09803 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Cdh1P09803 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cdh1P09803 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cdh1P09803 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.51■□□□□ 0.87
Cdh1P09803 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh1P09803 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh1P09803 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh1P09803 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh1P09803 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cdh1P09803 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh1P09803 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Cdh1P09803 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh1P09803 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cdh1P09803 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cdh1P09803 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh1P09803 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cdh1P09803 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cdh1P09803 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh1P09803 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh1P09803 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh1P09803 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh1P09803 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.5■□□□□ 0.87
Cdh1P09803 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh1P09803 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh1P09803 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cdh1P09803 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cdh1P09803 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cdh1P09803 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh1P09803 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh1P09803 Gm43530-201ENSMUST00000195920 274 ntBASIC20.49■□□□□ 0.87
Cdh1P09803 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh1P09803 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh1P09803 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cdh1P09803 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Cdh1P09803 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh1P09803 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Cdh1P09803 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh1P09803 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cdh1P09803 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.47■□□□□ 0.87
Cdh1P09803 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.47■□□□□ 0.87
Cdh1P09803 Gm43137-201ENSMUST00000198052 594 ntBASIC20.47■□□□□ 0.87
Cdh1P09803 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh1P09803 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh1P09803 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh1P09803 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.46■□□□□ 0.87
Cdh1P09803 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh1P09803 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh1P09803 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh1P09803 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh1P09803 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.46■□□□□ 0.87
Cdh1P09803 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.46■□□□□ 0.87
Cdh1P09803 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cdh1P09803 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh1P09803 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh1P09803 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.45■□□□□ 0.86
Cdh1P09803 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh1P09803 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms