Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Sod1P08228 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.39■□□□□ 0.69
Sod1P08228 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sod1P08228 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.39■□□□□ 0.69
Sod1P08228 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.39■□□□□ 0.69
Sod1P08228 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.39■□□□□ 0.69
Sod1P08228 Gm7291-201ENSMUST00000199147 382 ntBASIC19.39■□□□□ 0.69
Sod1P08228 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.39■□□□□ 0.69
Sod1P08228 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.39■□□□□ 0.69
Sod1P08228 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sod1P08228 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sod1P08228 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sod1P08228 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sod1P08228 Gm10849-201ENSMUST00000100397 618 ntBASIC19.38■□□□□ 0.69
Sod1P08228 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sod1P08228 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.38■□□□□ 0.69
Sod1P08228 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.38■□□□□ 0.69
Sod1P08228 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.38■□□□□ 0.69
Sod1P08228 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.38■□□□□ 0.69
Sod1P08228 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.38■□□□□ 0.69
Sod1P08228 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sod1P08228 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sod1P08228 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sod1P08228 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sod1P08228 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sod1P08228 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sod1P08228 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.37■□□□□ 0.69
Sod1P08228 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.37■□□□□ 0.69
Sod1P08228 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.37■□□□□ 0.69
Sod1P08228 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.37■□□□□ 0.69
Sod1P08228 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sod1P08228 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sod1P08228 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sod1P08228 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Sod1P08228 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sod1P08228 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sod1P08228 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.36■□□□□ 0.69
Sod1P08228 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sod1P08228 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sod1P08228 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sod1P08228 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sod1P08228 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.36■□□□□ 0.69
Sod1P08228 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sod1P08228 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sod1P08228 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.35■□□□□ 0.69
Sod1P08228 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sod1P08228 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Sod1P08228 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.35■□□□□ 0.69
Sod1P08228 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.35■□□□□ 0.69
Sod1P08228 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sod1P08228 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sod1P08228 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sod1P08228 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sod1P08228 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sod1P08228 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.35■□□□□ 0.69
Sod1P08228 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sod1P08228 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Gm27405-201ENSMUST00000184201 112 ntBASIC19.34■□□□□ 0.69
Sod1P08228 Gm42642-201ENSMUST00000200683 355 ntBASIC19.34■□□□□ 0.69
Sod1P08228 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sod1P08228 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sod1P08228 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sod1P08228 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sod1P08228 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sod1P08228 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sod1P08228 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sod1P08228 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sod1P08228 Gm42569-201ENSMUST00000200539 472 ntBASIC19.33■□□□□ 0.68
Sod1P08228 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sod1P08228 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sod1P08228 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Sod1P08228 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sod1P08228 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sod1P08228 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sod1P08228 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.32■□□□□ 0.68
Sod1P08228 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sod1P08228 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.32■□□□□ 0.68
Sod1P08228 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sod1P08228 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sod1P08228 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sod1P08228 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sod1P08228 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sod1P08228 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sod1P08228 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sod1P08228 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sod1P08228 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sod1P08228 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sod1P08228 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sod1P08228 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sod1P08228 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms