Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.56■□□□□ 0.24
P04940 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
P04940 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04940 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
P04940 Gm9870-201ENSMUST00000063874 645 ntBASIC16.56■□□□□ 0.24
P04940 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04940 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04940 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04940 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04940 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04940 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.55■□□□□ 0.24
P04940 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04940 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.55■□□□□ 0.24
P04940 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04940 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04940 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04940 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04940 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04940 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04940 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04940 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.53■□□□□ 0.24
P04940 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.53■□□□□ 0.24
P04940 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04940 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
P04940 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
P04940 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04940 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.52■□□□□ 0.24
P04940 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.52■□□□□ 0.24
P04940 Gm45102-201ENSMUST00000207427 857 ntBASIC16.52■□□□□ 0.24
P04940 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04940 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.52■□□□□ 0.23
P04940 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.52■□□□□ 0.23
P04940 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04940 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Gm22238-201ENSMUST00000175222 88 ntBASIC16.51■□□□□ 0.23
P04940 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04940 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
P04940 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
P04940 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
P04940 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.5■□□□□ 0.23
P04940 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.5■□□□□ 0.23
P04940 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
P04940 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.5■□□□□ 0.23
P04940 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
P04940 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04940 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04940 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04940 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04940 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.49■□□□□ 0.23
P04940 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.49■□□□□ 0.23
P04940 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
P04940 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
P04940 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.49■□□□□ 0.23
P04940 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.49■□□□□ 0.23
P04940 Rps24-207ENSMUST00000224568 714 ntBASIC16.49■□□□□ 0.23
P04940 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04940 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04940 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04940 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.48■□□□□ 0.23
P04940 Gm43530-201ENSMUST00000195920 274 ntBASIC16.48■□□□□ 0.23
P04940 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
P04940 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
P04940 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04940 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04940 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04940 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04940 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04940 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04940 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms