Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
P01852 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01852 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P01852 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.54■□□□□ 0.56
P01852 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P01852 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01852 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.53■□□□□ 0.56
P01852 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P01852 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01852 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01852 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P01852 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01852 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
P01852 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01852 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01852 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01852 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01852 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01852 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P01852 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P01852 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.52■□□□□ 0.56
P01852 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.52■□□□□ 0.56
P01852 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.52■□□□□ 0.56
P01852 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
P01852 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P01852 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.51■□□□□ 0.55
P01852 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01852 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01852 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.51■□□□□ 0.55
P01852 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01852 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
P01852 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.51■□□□□ 0.55
P01852 Gm13241-201ENSMUST00000094493 780 ntBASIC18.51■□□□□ 0.55
P01852 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
P01852 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01852 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P01852 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P01852 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.5■□□□□ 0.55
P01852 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
P01852 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.5■□□□□ 0.55
P01852 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.5■□□□□ 0.55
P01852 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
P01852 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P01852 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.5■□□□□ 0.55
P01852 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01852 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
P01852 Golgb1-201ENSMUST00000023534 498 ntBASIC18.49■□□□□ 0.55
P01852 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01852 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01852 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
P01852 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01852 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
P01852 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P01852 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.48■□□□□ 0.55
P01852 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
P01852 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P01852 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01852 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.47■□□□□ 0.55
P01852 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01852 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
P01852 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01852 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
P01852 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
P01852 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
P01852 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
P01852 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.46■□□□□ 0.55
P01852 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
P01852 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01852 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01852 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01852 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01852 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
P01852 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01852 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
P01852 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01852 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
P01852 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
P01852 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
P01852 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.45■□□□□ 0.54
P01852 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms