Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Syn1O88935 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.08■□□□□ 0.97
Syn1O88935 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Syn1O88935 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Syn1O88935 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Syn1O88935 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Syn1O88935 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Syn1O88935 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.08■□□□□ 0.96
Syn1O88935 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Syn1O88935 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Syn1O88935 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.08■□□□□ 0.96
Syn1O88935 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Syn1O88935 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.07■□□□□ 0.96
Syn1O88935 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syn1O88935 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.07■□□□□ 0.96
Syn1O88935 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syn1O88935 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syn1O88935 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syn1O88935 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Syn1O88935 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syn1O88935 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.06■□□□□ 0.96
Syn1O88935 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Syn1O88935 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.06■□□□□ 0.96
Syn1O88935 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.06■□□□□ 0.96
Syn1O88935 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Syn1O88935 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Syn1O88935 Gm22240-201ENSMUST00000175225 82 ntBASIC21.05■□□□□ 0.96
Syn1O88935 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syn1O88935 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syn1O88935 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syn1O88935 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syn1O88935 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
Syn1O88935 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Syn1O88935 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Syn1O88935 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syn1O88935 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.04■□□□□ 0.96
Syn1O88935 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.04■□□□□ 0.96
Syn1O88935 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syn1O88935 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Syn1O88935 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Syn1O88935 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syn1O88935 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syn1O88935 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syn1O88935 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Syn1O88935 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syn1O88935 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syn1O88935 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syn1O88935 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.03■□□□□ 0.96
Syn1O88935 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Syn1O88935 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Syn1O88935 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.02■□□□□ 0.96
Syn1O88935 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Syn1O88935 Gm12441-201ENSMUST00000121806 588 ntBASIC21.02■□□□□ 0.96
Syn1O88935 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.02■□□□□ 0.96
Syn1O88935 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syn1O88935 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.02■□□□□ 0.96
Syn1O88935 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syn1O88935 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syn1O88935 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Syn1O88935 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Syn1O88935 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.01■□□□□ 0.95
Syn1O88935 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Syn1O88935 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Syn1O88935 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syn1O88935 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syn1O88935 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syn1O88935 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syn1O88935 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Syn1O88935 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syn1O88935 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syn1O88935 Gm9988-201ENSMUST00000069786 435 ntBASIC21■□□□□ 0.95
Syn1O88935 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syn1O88935 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syn1O88935 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Syn1O88935 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Syn1O88935 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.99■□□□□ 0.95
Syn1O88935 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syn1O88935 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syn1O88935 Gm43530-201ENSMUST00000195920 274 ntBASIC20.99■□□□□ 0.95
Syn1O88935 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.99■□□□□ 0.95
Syn1O88935 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syn1O88935 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.99■□□□□ 0.95
Syn1O88935 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Syn1O88935 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Syn1O88935 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syn1O88935 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syn1O88935 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Syn1O88935 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syn1O88935 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syn1O88935 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syn1O88935 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syn1O88935 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.96■□□□□ 0.95
Syn1O88935 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.96■□□□□ 0.95
Syn1O88935 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syn1O88935 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.96■□□□□ 0.95
Syn1O88935 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syn1O88935 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Syn1O88935 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Syn1O88935 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Syn1O88935 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms