Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Becn1O88597 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Becn1O88597 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Becn1O88597 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Becn1O88597 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Becn1O88597 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Becn1O88597 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Becn1O88597 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Becn1O88597 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Becn1O88597 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Becn1O88597 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.08■■□□□ 1.29
Becn1O88597 Gm7332-201ENSMUST00000118351 454 ntBASIC23.08■■□□□ 1.29
Becn1O88597 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.08■■□□□ 1.29
Becn1O88597 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Becn1O88597 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Becn1O88597 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Becn1O88597 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Becn1O88597 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Becn1O88597 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC23.07■■□□□ 1.28
Becn1O88597 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Becn1O88597 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Becn1O88597 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Becn1O88597 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Becn1O88597 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.06■■□□□ 1.28
Becn1O88597 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.06■■□□□ 1.28
Becn1O88597 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Becn1O88597 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Becn1O88597 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Becn1O88597 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Becn1O88597 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Becn1O88597 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Becn1O88597 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.05■■□□□ 1.28
Becn1O88597 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Becn1O88597 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Becn1O88597 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Becn1O88597 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Becn1O88597 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Becn1O88597 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Becn1O88597 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Becn1O88597 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Becn1O88597 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Becn1O88597 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Becn1O88597 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Becn1O88597 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Becn1O88597 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Becn1O88597 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Becn1O88597 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.03■■□□□ 1.28
Becn1O88597 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Becn1O88597 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Becn1O88597 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Becn1O88597 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Becn1O88597 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Becn1O88597 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Becn1O88597 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.02■■□□□ 1.28
Becn1O88597 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.02■■□□□ 1.28
Becn1O88597 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.02■■□□□ 1.28
Becn1O88597 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC23.02■■□□□ 1.28
Becn1O88597 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Becn1O88597 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.02■■□□□ 1.28
Becn1O88597 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Becn1O88597 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Becn1O88597 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Becn1O88597 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
Becn1O88597 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Becn1O88597 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Becn1O88597 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.01■■□□□ 1.27
Becn1O88597 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Becn1O88597 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Becn1O88597 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Becn1O88597 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Becn1O88597 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Becn1O88597 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Becn1O88597 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Becn1O88597 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23■■□□□ 1.27
Becn1O88597 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23■■□□□ 1.27
Becn1O88597 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Becn1O88597 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Becn1O88597 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Becn1O88597 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Becn1O88597 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Becn1O88597 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Becn1O88597 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Becn1O88597 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms