Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim1O70400 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Pdlim1O70400 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim1O70400 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim1O70400 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.09■□□□□ 0.81
Pdlim1O70400 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.09■□□□□ 0.81
Pdlim1O70400 Gm13241-201ENSMUST00000094493 780 ntBASIC20.09■□□□□ 0.81
Pdlim1O70400 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdlim1O70400 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Pdlim1O70400 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim1O70400 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.08■□□□□ 0.81
Pdlim1O70400 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pdlim1O70400 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.08■□□□□ 0.8
Pdlim1O70400 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdlim1O70400 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pdlim1O70400 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim1O70400 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim1O70400 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pdlim1O70400 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim1O70400 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.07■□□□□ 0.8
Pdlim1O70400 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim1O70400 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim1O70400 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim1O70400 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Pdlim1O70400 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim1O70400 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdlim1O70400 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim1O70400 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim1O70400 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim1O70400 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim1O70400 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim1O70400 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.06■□□□□ 0.8
Pdlim1O70400 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim1O70400 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim1O70400 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdlim1O70400 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim1O70400 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim1O70400 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim1O70400 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.05■□□□□ 0.8
Pdlim1O70400 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pdlim1O70400 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pdlim1O70400 Notumos-201ENSMUST00000151998 2659 ntBASIC20.05■□□□□ 0.8
Pdlim1O70400 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pdlim1O70400 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pdlim1O70400 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim1O70400 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim1O70400 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim1O70400 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim1O70400 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim1O70400 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pdlim1O70400 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Pdlim1O70400 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.03■□□□□ 0.8
Pdlim1O70400 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim1O70400 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pdlim1O70400 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.03■□□□□ 0.8
Pdlim1O70400 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pdlim1O70400 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdlim1O70400 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.03■□□□□ 0.8
Pdlim1O70400 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim1O70400 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim1O70400 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim1O70400 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.02■□□□□ 0.8
Pdlim1O70400 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.02■□□□□ 0.8
Pdlim1O70400 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim1O70400 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.02■□□□□ 0.8
Pdlim1O70400 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pdlim1O70400 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Pdlim1O70400 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Pdlim1O70400 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim1O70400 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pdlim1O70400 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.01■□□□□ 0.79
Pdlim1O70400 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.01■□□□□ 0.79
Pdlim1O70400 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.01■□□□□ 0.79
Pdlim1O70400 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdlim1O70400 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim1O70400 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim1O70400 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Pdlim1O70400 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdlim1O70400 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim1O70400 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdlim1O70400 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pdlim1O70400 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pdlim1O70400 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdlim1O70400 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim1O70400 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.99■□□□□ 0.79
Pdlim1O70400 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim1O70400 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim1O70400 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim1O70400 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdlim1O70400 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdlim1O70400 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms