Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh5O55240 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.24■□□□□ 0.67
Rdh5O55240 Gm7417-201ENSMUST00000192950 473 ntBASIC19.24■□□□□ 0.67
Rdh5O55240 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.24■□□□□ 0.67
Rdh5O55240 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rdh5O55240 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rdh5O55240 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.23■□□□□ 0.67
Rdh5O55240 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.23■□□□□ 0.67
Rdh5O55240 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Rdh5O55240 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rdh5O55240 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rdh5O55240 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rdh5O55240 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rdh5O55240 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rdh5O55240 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rdh5O55240 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rdh5O55240 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rdh5O55240 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.21■□□□□ 0.67
Rdh5O55240 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh5O55240 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh5O55240 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh5O55240 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh5O55240 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rdh5O55240 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.2■□□□□ 0.66
Rdh5O55240 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Rdh5O55240 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh5O55240 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh5O55240 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rdh5O55240 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rdh5O55240 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Rdh5O55240 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.19■□□□□ 0.66
Rdh5O55240 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh5O55240 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh5O55240 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh5O55240 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh5O55240 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.19■□□□□ 0.66
Rdh5O55240 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rdh5O55240 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh5O55240 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh5O55240 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh5O55240 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rdh5O55240 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh5O55240 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rdh5O55240 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh5O55240 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh5O55240 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Rdh5O55240 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
Rdh5O55240 Gm7143-201ENSMUST00000222811 859 ntBASIC19.18■□□□□ 0.66
Rdh5O55240 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh5O55240 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh5O55240 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh5O55240 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh5O55240 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rdh5O55240 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rdh5O55240 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh5O55240 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh5O55240 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh5O55240 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh5O55240 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.17■□□□□ 0.66
Rdh5O55240 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh5O55240 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh5O55240 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rdh5O55240 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rdh5O55240 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh5O55240 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rdh5O55240 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh5O55240 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh5O55240 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Rdh5O55240 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.16■□□□□ 0.66
Rdh5O55240 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh5O55240 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh5O55240 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh5O55240 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.16■□□□□ 0.66
Rdh5O55240 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh5O55240 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rdh5O55240 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rdh5O55240 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rdh5O55240 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rdh5O55240 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms