Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh12O55134 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh12O55134 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh12O55134 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh12O55134 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdh12O55134 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh12O55134 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh12O55134 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh12O55134 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh12O55134 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Pcdh12O55134 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh12O55134 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh12O55134 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.38■□□□□ 0.53
Pcdh12O55134 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh12O55134 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh12O55134 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh12O55134 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdh12O55134 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh12O55134 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh12O55134 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh12O55134 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh12O55134 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh12O55134 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh12O55134 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.36■□□□□ 0.53
Pcdh12O55134 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdh12O55134 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh12O55134 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh12O55134 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh12O55134 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh12O55134 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh12O55134 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh12O55134 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh12O55134 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh12O55134 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh12O55134 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh12O55134 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh12O55134 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh12O55134 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
Pcdh12O55134 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdh12O55134 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh12O55134 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh12O55134 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh12O55134 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh12O55134 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh12O55134 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh12O55134 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh12O55134 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Pcdh12O55134 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh12O55134 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh12O55134 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdh12O55134 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh12O55134 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh12O55134 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh12O55134 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh12O55134 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh12O55134 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh12O55134 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Iqck-206ENSMUST00000208658 2891 ntBASIC18.31■□□□□ 0.52
Pcdh12O55134 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Pcdh12O55134 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh12O55134 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh12O55134 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdh12O55134 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.3■□□□□ 0.52
Pcdh12O55134 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.3■□□□□ 0.52
Pcdh12O55134 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdh12O55134 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms