Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc4O35988 Serp2-204ENSMUST00000228055 705 ntBASIC20.99■□□□□ 0.95
Sdc4O35988 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.99■□□□□ 0.95
Sdc4O35988 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sdc4O35988 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.98■□□□□ 0.95
Sdc4O35988 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.98■□□□□ 0.95
Sdc4O35988 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc4O35988 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Sdc4O35988 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Sdc4O35988 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.98■□□□□ 0.95
Sdc4O35988 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.98■□□□□ 0.95
Sdc4O35988 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc4O35988 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc4O35988 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sdc4O35988 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.97■□□□□ 0.95
Sdc4O35988 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Sdc4O35988 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc4O35988 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc4O35988 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Sdc4O35988 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.97■□□□□ 0.95
Sdc4O35988 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdc4O35988 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.97■□□□□ 0.95
Sdc4O35988 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Sdc4O35988 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Sdc4O35988 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc4O35988 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc4O35988 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.96■□□□□ 0.95
Sdc4O35988 Mir7075-201ENSMUST00000184187 82 ntBASIC20.96■□□□□ 0.95
Sdc4O35988 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc4O35988 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sdc4O35988 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdc4O35988 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sdc4O35988 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Sdc4O35988 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Sdc4O35988 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sdc4O35988 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc4O35988 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc4O35988 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc4O35988 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.94■□□□□ 0.94
Sdc4O35988 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.94■□□□□ 0.94
Sdc4O35988 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc4O35988 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sdc4O35988 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc4O35988 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc4O35988 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc4O35988 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.93■□□□□ 0.94
Sdc4O35988 Gm6139-201ENSMUST00000079261 882 ntBASIC20.93■□□□□ 0.94
Sdc4O35988 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc4O35988 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Sdc4O35988 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc4O35988 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Sdc4O35988 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc4O35988 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc4O35988 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.92■□□□□ 0.94
Sdc4O35988 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc4O35988 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc4O35988 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sdc4O35988 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc4O35988 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Sdc4O35988 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc4O35988 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc4O35988 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc4O35988 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc4O35988 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.91■□□□□ 0.94
Sdc4O35988 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Sdc4O35988 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc4O35988 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc4O35988 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
Sdc4O35988 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc4O35988 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc4O35988 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Sdc4O35988 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc4O35988 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.9■□□□□ 0.94
Sdc4O35988 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc4O35988 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc4O35988 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sdc4O35988 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.89■□□□□ 0.94
Sdc4O35988 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc4O35988 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.89■□□□□ 0.93
Sdc4O35988 Gm8493-201ENSMUST00000196881 489 ntBASIC20.89■□□□□ 0.93
Sdc4O35988 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.89■□□□□ 0.93
Sdc4O35988 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc4O35988 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc4O35988 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc4O35988 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.88■□□□□ 0.93
Sdc4O35988 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.88■□□□□ 0.93
Sdc4O35988 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
Sdc4O35988 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
Sdc4O35988 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc4O35988 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc4O35988 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sdc4O35988 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc4O35988 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.88■□□□□ 0.93
Sdc4O35988 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc4O35988 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc4O35988 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc4O35988 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Sdc4O35988 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc4O35988 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc4O35988 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms