Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx8O35652 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.52■□□□□ 0.72
Lhx8O35652 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx8O35652 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lhx8O35652 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lhx8O35652 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.51■□□□□ 0.71
Lhx8O35652 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.51■□□□□ 0.71
Lhx8O35652 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Lhx8O35652 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lhx8O35652 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx8O35652 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx8O35652 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Lhx8O35652 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx8O35652 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lhx8O35652 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Lhx8O35652 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Lhx8O35652 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.49■□□□□ 0.71
Lhx8O35652 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lhx8O35652 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lhx8O35652 Gm12922-201ENSMUST00000120626 809 ntBASIC19.49■□□□□ 0.71
Lhx8O35652 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.49■□□□□ 0.71
Lhx8O35652 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lhx8O35652 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lhx8O35652 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lhx8O35652 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Lhx8O35652 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.48■□□□□ 0.71
Lhx8O35652 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lhx8O35652 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx8O35652 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx8O35652 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx8O35652 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.47■□□□□ 0.71
Lhx8O35652 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lhx8O35652 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Lhx8O35652 Gm22238-201ENSMUST00000175222 88 ntBASIC19.46■□□□□ 0.71
Lhx8O35652 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.46■□□□□ 0.71
Lhx8O35652 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lhx8O35652 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lhx8O35652 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx8O35652 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx8O35652 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lhx8O35652 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx8O35652 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lhx8O35652 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx8O35652 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.45■□□□□ 0.7
Lhx8O35652 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx8O35652 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Lhx8O35652 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Lhx8O35652 Golph3-202ENSMUST00000226517 2359 ntBASIC19.45■□□□□ 0.7
Lhx8O35652 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Lhx8O35652 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx8O35652 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx8O35652 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.44■□□□□ 0.7
Lhx8O35652 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.44■□□□□ 0.7
Lhx8O35652 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.44■□□□□ 0.7
Lhx8O35652 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.44■□□□□ 0.7
Lhx8O35652 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx8O35652 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms