Protein–RNA interactions for Protein: O35646

Capn6, Calpain-6, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6O35646 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Capn6O35646 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Capn6O35646 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Capn6O35646 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.76■□□□□ 0.91
Capn6O35646 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.76■□□□□ 0.91
Capn6O35646 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Capn6O35646 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Capn6O35646 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Capn6O35646 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Capn6O35646 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Capn6O35646 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Capn6O35646 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Capn6O35646 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn6O35646 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Capn6O35646 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn6O35646 Cap2-205ENSMUST00000225824 1634 ntBASIC20.75■□□□□ 0.91
Capn6O35646 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn6O35646 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn6O35646 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.75■□□□□ 0.91
Capn6O35646 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
Capn6O35646 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.75■□□□□ 0.91
Capn6O35646 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn6O35646 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn6O35646 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capn6O35646 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capn6O35646 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.74■□□□□ 0.91
Capn6O35646 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capn6O35646 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capn6O35646 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capn6O35646 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.74■□□□□ 0.91
Capn6O35646 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.73■□□□□ 0.91
Capn6O35646 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Capn6O35646 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capn6O35646 Golph3-202ENSMUST00000226517 2359 ntBASIC20.73■□□□□ 0.91
Capn6O35646 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.73■□□□□ 0.91
Capn6O35646 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capn6O35646 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Capn6O35646 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.73■□□□□ 0.91
Capn6O35646 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Capn6O35646 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.73■□□□□ 0.91
Capn6O35646 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capn6O35646 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.72■□□□□ 0.91
Capn6O35646 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Capn6O35646 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Capn6O35646 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Capn6O35646 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capn6O35646 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capn6O35646 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.71■□□□□ 0.91
Capn6O35646 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.71■□□□□ 0.91
Capn6O35646 Gm13238-201ENSMUST00000117655 780 ntBASIC20.71■□□□□ 0.91
Capn6O35646 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capn6O35646 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capn6O35646 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capn6O35646 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Capn6O35646 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capn6O35646 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Capn6O35646 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capn6O35646 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Capn6O35646 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capn6O35646 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capn6O35646 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Capn6O35646 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capn6O35646 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capn6O35646 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.69■□□□□ 0.9
Capn6O35646 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Capn6O35646 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Capn6O35646 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Capn6O35646 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Capn6O35646 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.68■□□□□ 0.9
Capn6O35646 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.68■□□□□ 0.9
Capn6O35646 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Capn6O35646 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Capn6O35646 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Capn6O35646 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.67■□□□□ 0.9
Capn6O35646 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Capn6O35646 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Capn6O35646 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Capn6O35646 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.66■□□□□ 0.9
Capn6O35646 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms