Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm6754-201ENSMUST00000117124 913 ntBASIC21.23■□□□□ 0.99
Clcn6O35454 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Clcn6O35454 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn6O35454 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn6O35454 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Clcn6O35454 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Clcn6O35454 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn6O35454 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn6O35454 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn6O35454 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn6O35454 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn6O35454 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.22■□□□□ 0.99
Clcn6O35454 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Clcn6O35454 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Clcn6O35454 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clcn6O35454 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn6O35454 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn6O35454 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn6O35454 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.21■□□□□ 0.99
Clcn6O35454 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn6O35454 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn6O35454 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn6O35454 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.21■□□□□ 0.99
Clcn6O35454 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clcn6O35454 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.21■□□□□ 0.99
Clcn6O35454 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn6O35454 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Clcn6O35454 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Clcn6O35454 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Clcn6O35454 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.2■□□□□ 0.98
Clcn6O35454 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Clcn6O35454 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC21.2■□□□□ 0.98
Clcn6O35454 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn6O35454 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn6O35454 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clcn6O35454 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.19■□□□□ 0.98
Clcn6O35454 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.19■□□□□ 0.98
Clcn6O35454 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn6O35454 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn6O35454 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn6O35454 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn6O35454 Gm11434-201ENSMUST00000122379 629 ntBASIC21.18■□□□□ 0.98
Clcn6O35454 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.18■□□□□ 0.98
Clcn6O35454 Gm5812-201ENSMUST00000061073 957 ntBASIC21.18■□□□□ 0.98
Clcn6O35454 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn6O35454 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Clcn6O35454 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn6O35454 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn6O35454 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
Clcn6O35454 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn6O35454 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.17■□□□□ 0.98
Clcn6O35454 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.17■□□□□ 0.98
Clcn6O35454 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn6O35454 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn6O35454 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn6O35454 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn6O35454 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn6O35454 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn6O35454 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Clcn6O35454 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn6O35454 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Clcn6O35454 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn6O35454 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn6O35454 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn6O35454 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Clcn6O35454 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Clcn6O35454 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.16■□□□□ 0.98
Clcn6O35454 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Clcn6O35454 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Clcn6O35454 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn6O35454 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn6O35454 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clcn6O35454 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn6O35454 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn6O35454 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC21.15■□□□□ 0.98
Clcn6O35454 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Clcn6O35454 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn6O35454 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn6O35454 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.15■□□□□ 0.98
Clcn6O35454 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clcn6O35454 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clcn6O35454 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn6O35454 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.14■□□□□ 0.97
Clcn6O35454 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Clcn6O35454 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn6O35454 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.14■□□□□ 0.97
Clcn6O35454 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn6O35454 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Clcn6O35454 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn6O35454 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn6O35454 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms