Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.19■□□□□ 0.34
Prrt1O35449 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prrt1O35449 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prrt1O35449 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Prrt1O35449 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prrt1O35449 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prrt1O35449 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.18■□□□□ 0.34
Prrt1O35449 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.18■□□□□ 0.34
Prrt1O35449 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prrt1O35449 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prrt1O35449 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prrt1O35449 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prrt1O35449 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Prrt1O35449 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.17■□□□□ 0.34
Prrt1O35449 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.17■□□□□ 0.34
Prrt1O35449 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Prrt1O35449 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prrt1O35449 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prrt1O35449 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Prrt1O35449 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.16■□□□□ 0.34
Prrt1O35449 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prrt1O35449 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Prrt1O35449 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Prrt1O35449 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Prrt1O35449 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prrt1O35449 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Prrt1O35449 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Prrt1O35449 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.14■□□□□ 0.33
Prrt1O35449 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Prrt1O35449 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prrt1O35449 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.14■□□□□ 0.33
Prrt1O35449 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prrt1O35449 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prrt1O35449 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt1O35449 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Prrt1O35449 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt1O35449 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt1O35449 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.13■□□□□ 0.33
Prrt1O35449 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.13■□□□□ 0.33
Prrt1O35449 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.13■□□□□ 0.33
Prrt1O35449 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt1O35449 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt1O35449 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prrt1O35449 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Prrt1O35449 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt1O35449 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt1O35449 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt1O35449 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Prrt1O35449 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt1O35449 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt1O35449 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.12■□□□□ 0.33
Prrt1O35449 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.12■□□□□ 0.33
Prrt1O35449 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt1O35449 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.12■□□□□ 0.33
Prrt1O35449 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt1O35449 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prrt1O35449 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.12■□□□□ 0.33
Prrt1O35449 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.11■□□□□ 0.33
Prrt1O35449 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.11■□□□□ 0.33
Prrt1O35449 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.11■□□□□ 0.33
Prrt1O35449 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prrt1O35449 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms