Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfrsf11bO08712 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf11bO08712 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tnfrsf11bO08712 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf11bO08712 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tnfrsf11bO08712 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf11bO08712 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tnfrsf11bO08712 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.65■□□□□ 0.9
Tnfrsf11bO08712 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf11bO08712 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnfrsf11bO08712 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnfrsf11bO08712 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11bO08712 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnfrsf11bO08712 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11bO08712 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11bO08712 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11bO08712 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf11bO08712 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnfrsf11bO08712 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.63■□□□□ 0.89
Tnfrsf11bO08712 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf11bO08712 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf11bO08712 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11bO08712 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11bO08712 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tnfrsf11bO08712 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11bO08712 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11bO08712 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf11bO08712 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf11bO08712 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf11bO08712 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf11bO08712 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf11bO08712 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms