Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rundc3aO08576 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rundc3aO08576 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rundc3aO08576 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rundc3aO08576 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Rundc3aO08576 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.83■□□□□ 0.77
Rundc3aO08576 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rundc3aO08576 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rundc3aO08576 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rundc3aO08576 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.82■□□□□ 0.76
Rundc3aO08576 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.82■□□□□ 0.76
Rundc3aO08576 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rundc3aO08576 Gm13238-201ENSMUST00000117655 780 ntBASIC19.82■□□□□ 0.76
Rundc3aO08576 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.82■□□□□ 0.76
Rundc3aO08576 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rundc3aO08576 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rundc3aO08576 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rundc3aO08576 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rundc3aO08576 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3aO08576 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3aO08576 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3aO08576 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rundc3aO08576 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3aO08576 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.81■□□□□ 0.76
Rundc3aO08576 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3aO08576 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rundc3aO08576 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rundc3aO08576 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.81■□□□□ 0.76
Rundc3aO08576 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.8■□□□□ 0.76
Rundc3aO08576 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.8■□□□□ 0.76
Rundc3aO08576 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rundc3aO08576 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rundc3aO08576 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rundc3aO08576 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.79■□□□□ 0.76
Rundc3aO08576 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rundc3aO08576 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rundc3aO08576 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rundc3aO08576 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 Gm43566-201ENSMUST00000196851 808 ntBASIC19.78■□□□□ 0.76
Rundc3aO08576 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rundc3aO08576 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rundc3aO08576 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rundc3aO08576 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rundc3aO08576 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rundc3aO08576 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.77■□□□□ 0.76
Rundc3aO08576 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.77■□□□□ 0.76
Rundc3aO08576 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.77■□□□□ 0.76
Rundc3aO08576 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rundc3aO08576 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3aO08576 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rundc3aO08576 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3aO08576 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3aO08576 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3aO08576 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3aO08576 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3aO08576 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3aO08576 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3aO08576 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3aO08576 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rundc3aO08576 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3aO08576 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3aO08576 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3aO08576 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3aO08576 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3aO08576 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3aO08576 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rundc3aO08576 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.74■□□□□ 0.75
Rundc3aO08576 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rundc3aO08576 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rundc3aO08576 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rundc3aO08576 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.74■□□□□ 0.75
Rundc3aO08576 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.74■□□□□ 0.75
Rundc3aO08576 Gm5921-201ENSMUST00000075898 882 ntBASIC19.74■□□□□ 0.75
Rundc3aO08576 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rundc3aO08576 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rundc3aO08576 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rundc3aO08576 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3aO08576 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms