Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim55G3X8Y1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim55G3X8Y1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim55G3X8Y1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim55G3X8Y1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim55G3X8Y1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim55G3X8Y1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim55G3X8Y1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim55G3X8Y1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trim55G3X8Y1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim55G3X8Y1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim55G3X8Y1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim55G3X8Y1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim55G3X8Y1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim55G3X8Y1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Trim55G3X8Y1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim55G3X8Y1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim55G3X8Y1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim55G3X8Y1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim55G3X8Y1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.67■□□□□ 0.9
Trim55G3X8Y1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim55G3X8Y1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim55G3X8Y1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.64■□□□□ 0.9
Trim55G3X8Y1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim55G3X8Y1 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.63■□□□□ 0.89
Trim55G3X8Y1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms