Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC33.08■■■□□ 2.89
Ift140E9PY46 Gm4968-201ENSMUST00000071458 858 ntBASIC33.08■■■□□ 2.89
Ift140E9PY46 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
Ift140E9PY46 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Ift140E9PY46 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC33.07■■■□□ 2.88
Ift140E9PY46 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Ift140E9PY46 Ap3s1-204ENSMUST00000225520 957 ntBASIC33.06■■■□□ 2.88
Ift140E9PY46 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Ift140E9PY46 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
Ift140E9PY46 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC33.06■■■□□ 2.88
Ift140E9PY46 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
Ift140E9PY46 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ift140E9PY46 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
Ift140E9PY46 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
Ift140E9PY46 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ift140E9PY46 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Ift140E9PY46 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC33.05■■■□□ 2.88
Ift140E9PY46 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ift140E9PY46 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC33.05■■■□□ 2.88
Ift140E9PY46 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Ift140E9PY46 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ift140E9PY46 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ift140E9PY46 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ift140E9PY46 Gm20760-201ENSMUST00000179197 648 ntBASIC33.04■■■□□ 2.88
Ift140E9PY46 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC33.04■■■□□ 2.88
Ift140E9PY46 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ift140E9PY46 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ift140E9PY46 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
Ift140E9PY46 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ift140E9PY46 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ift140E9PY46 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ift140E9PY46 AC137127.1-201ENSMUST00000213466 1078 ntBASIC33.02■■■□□ 2.88
Ift140E9PY46 Gm9988-201ENSMUST00000069786 435 ntBASIC33.02■■■□□ 2.88
Ift140E9PY46 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ift140E9PY46 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ift140E9PY46 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.88
Ift140E9PY46 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Ift140E9PY46 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC33.01■■■□□ 2.88
Ift140E9PY46 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Ift140E9PY46 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
Ift140E9PY46 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC33■■■□□ 2.87
Ift140E9PY46 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC33■■■□□ 2.87
Ift140E9PY46 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC33■■■□□ 2.87
Ift140E9PY46 Reep4-203ENSMUST00000226563 1444 ntBASIC33■■■□□ 2.87
Ift140E9PY46 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC33■■■□□ 2.87
Ift140E9PY46 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
Ift140E9PY46 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Ift140E9PY46 Gm22325-201ENSMUST00000158904 308 ntBASIC32.99■■■□□ 2.87
Ift140E9PY46 Gm22240-201ENSMUST00000175225 82 ntBASIC32.99■■■□□ 2.87
Ift140E9PY46 Gm42555-201ENSMUST00000199304 1039 ntBASIC32.99■■■□□ 2.87
Ift140E9PY46 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC32.98■■■□□ 2.87
Ift140E9PY46 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Ift140E9PY46 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Ift140E9PY46 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
Ift140E9PY46 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ift140E9PY46 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ift140E9PY46 Gm12527-201ENSMUST00000117967 564 ntBASIC32.97■■■□□ 2.87
Ift140E9PY46 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
Ift140E9PY46 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ift140E9PY46 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ift140E9PY46 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ift140E9PY46 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
Ift140E9PY46 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC32.96■■■□□ 2.87
Ift140E9PY46 Mir5133-201ENSMUST00000174955 77 ntBASIC32.96■■■□□ 2.87
Ift140E9PY46 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ift140E9PY46 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC32.96■■■□□ 2.87
Ift140E9PY46 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC32.95■■■□□ 2.87
Ift140E9PY46 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ift140E9PY46 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ift140E9PY46 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ift140E9PY46 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
Ift140E9PY46 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Ift140E9PY46 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC32.93■■■□□ 2.86
Ift140E9PY46 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC32.93■■■□□ 2.86
Ift140E9PY46 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ift140E9PY46 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
Ift140E9PY46 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Ift140E9PY46 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
Ift140E9PY46 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ift140E9PY46 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Ift140E9PY46 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Ift140E9PY46 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ift140E9PY46 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ift140E9PY46 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ift140E9PY46 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Ift140E9PY46 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ift140E9PY46 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Ift140E9PY46 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC32.9■■■□□ 2.86
Ift140E9PY46 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ift140E9PY46 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
Ift140E9PY46 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
Ift140E9PY46 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ift140E9PY46 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Ift140E9PY46 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Ift140E9PY46 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ift140E9PY46 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC32.87■■■□□ 2.85
Ift140E9PY46 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Ift140E9PY46 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Ift140E9PY46 Gm7514-201ENSMUST00000209475 934 ntBASIC32.87■■■□□ 2.85
Ift140E9PY46 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms