Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdh17E9PXF0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdh17E9PXF0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh17E9PXF0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh17E9PXF0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdh17E9PXF0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.86■□□□□ 0.61
Pcdh17E9PXF0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.86■□□□□ 0.61
Pcdh17E9PXF0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdh17E9PXF0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh17E9PXF0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh17E9PXF0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Pcdh17E9PXF0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh17E9PXF0 Mir7075-201ENSMUST00000184187 82 ntBASIC18.84■□□□□ 0.61
Pcdh17E9PXF0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh17E9PXF0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh17E9PXF0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh17E9PXF0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdh17E9PXF0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.83■□□□□ 0.61
Pcdh17E9PXF0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh17E9PXF0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh17E9PXF0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.83■□□□□ 0.61
Pcdh17E9PXF0 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.83■□□□□ 0.6
Pcdh17E9PXF0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Pcdh17E9PXF0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh17E9PXF0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdh17E9PXF0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh17E9PXF0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh17E9PXF0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh17E9PXF0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh17E9PXF0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh17E9PXF0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh17E9PXF0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.8■□□□□ 0.6
Pcdh17E9PXF0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh17E9PXF0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh17E9PXF0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms