Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col6a3E9PWQ3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Col6a3E9PWQ3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.95■□□□□ 0.94
Col6a3E9PWQ3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col6a3E9PWQ3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col6a3E9PWQ3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Col6a3E9PWQ3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col6a3E9PWQ3 Gm25925-201ENSMUST00000158314 306 ntBASIC20.95■□□□□ 0.94
Col6a3E9PWQ3 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.95■□□□□ 0.94
Col6a3E9PWQ3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col6a3E9PWQ3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.94■□□□□ 0.94
Col6a3E9PWQ3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col6a3E9PWQ3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col6a3E9PWQ3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col6a3E9PWQ3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col6a3E9PWQ3 Trmt13-210ENSMUST00000198454 880 ntBASIC20.92■□□□□ 0.94
Col6a3E9PWQ3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col6a3E9PWQ3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.92■□□□□ 0.94
Col6a3E9PWQ3 Gm11643-201ENSMUST00000119578 864 ntBASIC20.92■□□□□ 0.94
Col6a3E9PWQ3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Col6a3E9PWQ3 Gm27741-201ENSMUST00000185060 237 ntBASIC20.91■□□□□ 0.94
Col6a3E9PWQ3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col6a3E9PWQ3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.91■□□□□ 0.94
Col6a3E9PWQ3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Col6a3E9PWQ3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col6a3E9PWQ3 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.9■□□□□ 0.94
Col6a3E9PWQ3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.9■□□□□ 0.94
Col6a3E9PWQ3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Col6a3E9PWQ3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col6a3E9PWQ3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col6a3E9PWQ3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col6a3E9PWQ3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col6a3E9PWQ3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col6a3E9PWQ3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col6a3E9PWQ3 Gm5408-201ENSMUST00000197998 747 ntBASIC20.89■□□□□ 0.93
Col6a3E9PWQ3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col6a3E9PWQ3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col6a3E9PWQ3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Col6a3E9PWQ3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col6a3E9PWQ3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col6a3E9PWQ3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.88■□□□□ 0.93
Col6a3E9PWQ3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col6a3E9PWQ3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col6a3E9PWQ3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col6a3E9PWQ3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col6a3E9PWQ3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.87■□□□□ 0.93
Col6a3E9PWQ3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC20.87■□□□□ 0.93
Col6a3E9PWQ3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Col6a3E9PWQ3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col6a3E9PWQ3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col6a3E9PWQ3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col6a3E9PWQ3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col6a3E9PWQ3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col6a3E9PWQ3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col6a3E9PWQ3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col6a3E9PWQ3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col6a3E9PWQ3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Col6a3E9PWQ3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col6a3E9PWQ3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col6a3E9PWQ3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.84■□□□□ 0.93
Col6a3E9PWQ3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.84■□□□□ 0.93
Col6a3E9PWQ3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Col6a3E9PWQ3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.84■□□□□ 0.93
Col6a3E9PWQ3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col6a3E9PWQ3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.83■□□□□ 0.93
Col6a3E9PWQ3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col6a3E9PWQ3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col6a3E9PWQ3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col6a3E9PWQ3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.83■□□□□ 0.92
Col6a3E9PWQ3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col6a3E9PWQ3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.82■□□□□ 0.92
Col6a3E9PWQ3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.81■□□□□ 0.92
Col6a3E9PWQ3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.81■□□□□ 0.92
Col6a3E9PWQ3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col6a3E9PWQ3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col6a3E9PWQ3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms