Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn1aA2APX8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.55■■□□□ 1.04
Scn1aA2APX8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn1aA2APX8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn1aA2APX8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn1aA2APX8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn1aA2APX8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn1aA2APX8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn1aA2APX8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scn1aA2APX8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn1aA2APX8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.54■■□□□ 1.04
Scn1aA2APX8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn1aA2APX8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.54■■□□□ 1.04
Scn1aA2APX8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.54■■□□□ 1.04
Scn1aA2APX8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.54■■□□□ 1.04
Scn1aA2APX8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn1aA2APX8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn1aA2APX8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn1aA2APX8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.53■■□□□ 1.04
Scn1aA2APX8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn1aA2APX8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.53■■□□□ 1.04
Scn1aA2APX8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn1aA2APX8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.53■■□□□ 1.04
Scn1aA2APX8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
Scn1aA2APX8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
Scn1aA2APX8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scn1aA2APX8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn1aA2APX8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn1aA2APX8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn1aA2APX8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Scn1aA2APX8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Scn1aA2APX8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn1aA2APX8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn1aA2APX8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn1aA2APX8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn1aA2APX8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.5■■□□□ 1.03
Scn1aA2APX8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.5■■□□□ 1.03
Scn1aA2APX8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Scn1aA2APX8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn1aA2APX8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn1aA2APX8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn1aA2APX8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scn1aA2APX8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.49■■□□□ 1.03
Scn1aA2APX8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn1aA2APX8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn1aA2APX8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn1aA2APX8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.48■■□□□ 1.03
Scn1aA2APX8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn1aA2APX8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn1aA2APX8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn1aA2APX8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn1aA2APX8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn1aA2APX8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn1aA2APX8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn1aA2APX8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Scn1aA2APX8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn1aA2APX8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Scn1aA2APX8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn1aA2APX8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.47■■□□□ 1.03
Scn1aA2APX8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scn1aA2APX8 Gm6139-201ENSMUST00000079261 882 ntBASIC21.46■■□□□ 1.03
Scn1aA2APX8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scn1aA2APX8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Scn1aA2APX8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn1aA2APX8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scn1aA2APX8 Spcs1-204ENSMUST00000226782 949 ntBASIC21.45■■□□□ 1.02
Scn1aA2APX8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn1aA2APX8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Scn1aA2APX8 Gm43173-201ENSMUST00000202246 593 ntBASIC21.45■■□□□ 1.02
Scn1aA2APX8 Serp2-204ENSMUST00000228055 705 ntBASIC21.45■■□□□ 1.02
Scn1aA2APX8 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.45■■□□□ 1.02
Scn1aA2APX8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn1aA2APX8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms