Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trav12-1A0N8R1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12-1A0N8R1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trav12-1A0N8R1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav12-1A0N8R1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17■□□□□ 0.31
Trav12-1A0N8R1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trav12-1A0N8R1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-1A0N8R1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-1A0N8R1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Trav12-1A0N8R1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-1A0N8R1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-1A0N8R1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav12-1A0N8R1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav12-1A0N8R1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav12-1A0N8R1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12-1A0N8R1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12-1A0N8R1 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.96■□□□□ 0.31
Trav12-1A0N8R1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12-1A0N8R1 Gm45444-201ENSMUST00000211394 898 ntBASIC16.96■□□□□ 0.31
Trav12-1A0N8R1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12-1A0N8R1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12-1A0N8R1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav12-1A0N8R1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trav12-1A0N8R1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav12-1A0N8R1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.93■□□□□ 0.3
Trav12-1A0N8R1 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms