Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv3-5A0A140T8M6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Gm10420-201ENSMUST00000121713 882 ntBASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv3-5A0A140T8M6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv3-5A0A140T8M6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Igkv3-5A0A140T8M6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Igkv3-5A0A140T8M6 Gm43403-201ENSMUST00000198011 1786 ntBASIC12.77□□□□□ -0.36
Igkv3-5A0A140T8M6 Gm38160-201ENSMUST00000193090 2499 ntBASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Gm12366-201ENSMUST00000121722 873 ntBASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Gm5786-201ENSMUST00000085368 882 ntBASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Igkv3-5A0A140T8M6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Gm44949-201ENSMUST00000206423 1450 ntBASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Igkv3-5A0A140T8M6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Igkv3-5A0A140T8M6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Igkv3-5A0A140T8M6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms