Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Gm10420-201ENSMUST00000121713 882 ntBASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Gm12366-201ENSMUST00000121722 873 ntBASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Gm5786-201ENSMUST00000085368 882 ntBASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-4A0A0G2JFX3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.9□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.9□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav13d-4A0A0G2JFX3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms