Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav9n-2A0A0G2JDP3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Gm5812-201ENSMUST00000061073 957 ntBASIC14.74□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Gm40881-201ENSMUST00000223397 166 ntBASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Gm15546-201ENSMUST00000122095 826 ntBASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.71□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.71□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9n-2A0A0G2JDP3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav9n-2A0A0G2JDP3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.71□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.68□□□□□ -0.06
Trav9n-2A0A0G2JDP3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.68□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-2A0A0G2JDP3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav9n-2A0A0G2JDP3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms