Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-12A0A0A6YXJ9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-12A0A0A6YXJ9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-12A0A0A6YXJ9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.27■□□□□ 0.04
Ighv1-12A0A0A6YXJ9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-12A0A0A6YXJ9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-12A0A0A6YXJ9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.27■□□□□ 0.04
Ighv1-12A0A0A6YXJ9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm7143-201ENSMUST00000222811 859 ntBASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.25■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Rps24-207ENSMUST00000224568 714 ntBASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm45102-201ENSMUST00000207427 857 ntBASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-12A0A0A6YXJ9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Gm14117-201ENSMUST00000122417 843 ntBASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-12A0A0A6YXJ9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms