Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.46■□□□□ 0.23
Ighv1-20A0A0A6YX66 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Ighv1-20A0A0A6YX66 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.46■□□□□ 0.23
Ighv1-20A0A0A6YX66 Gm27454-201ENSMUST00000185090 204 ntBASIC16.46■□□□□ 0.23
Ighv1-20A0A0A6YX66 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-20A0A0A6YX66 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-20A0A0A6YX66 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ighv1-20A0A0A6YX66 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Gm43530-201ENSMUST00000195920 274 ntBASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-20A0A0A6YX66 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-20A0A0A6YX66 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ighv1-20A0A0A6YX66 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-20A0A0A6YX66 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-20A0A0A6YX66 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-20A0A0A6YX66 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.41■□□□□ 0.22
Ighv1-20A0A0A6YX66 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-20A0A0A6YX66 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ighv1-20A0A0A6YX66 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-20A0A0A6YX66 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-20A0A0A6YX66 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-20A0A0A6YX66 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Gm45417-201ENSMUST00000209533 758 ntBASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-20A0A0A6YX66 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-20A0A0A6YX66 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-20A0A0A6YX66 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.39■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.39■□□□□ 0.21
Ighv1-20A0A0A6YX66 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv1-20A0A0A6YX66 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-20A0A0A6YX66 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm43137-201ENSMUST00000198052 594 ntBASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-20A0A0A6YX66 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-20A0A0A6YX66 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms