Protein–RNA interactions for Protein: A0A0A6YW26

Ighv8-4, Immunoglobulin heavy variable V8-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-4A0A0A6YW26 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv8-4A0A0A6YW26 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv8-4A0A0A6YW26 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Rps24-207ENSMUST00000224568 714 ntBASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Gm10232-201ENSMUST00000089221 720 ntBASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv8-4A0A0A6YW26 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv8-4A0A0A6YW26 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv8-4A0A0A6YW26 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv8-4A0A0A6YW26 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv8-4A0A0A6YW26 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ighv8-4A0A0A6YW26 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv8-4A0A0A6YW26 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv8-4A0A0A6YW26 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.31■□□□□ 0.04
Ighv8-4A0A0A6YW26 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv8-4A0A0A6YW26 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv8-4A0A0A6YW26 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv8-4A0A0A6YW26 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv8-4A0A0A6YW26 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.3■□□□□ 0.04
Ighv8-4A0A0A6YW26 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms