Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav5-4A0A075B652 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5-4A0A075B652 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.86■□□□□ 0.29
Trav5-4A0A075B652 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Gm10232-201ENSMUST00000089221 720 ntBASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5-4A0A075B652 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5-4A0A075B652 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
Trav5-4A0A075B652 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav5-4A0A075B652 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 Gm10399-202ENSMUST00000202768 748 ntBASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-4A0A075B652 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-4A0A075B652 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-4A0A075B652 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-4A0A075B652 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-4A0A075B652 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-4A0A075B652 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-4A0A075B652 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav5-4A0A075B652 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 153.2 ms