Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13-2A0A075B649 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Gm5987-201ENSMUST00000196433 1151 ntBASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13-2A0A075B649 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13-2A0A075B649 Gm5913-201ENSMUST00000119397 1399 ntBASIC13.58□□□□□ -0.23
Trav13-2A0A075B649 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13-2A0A075B649 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13-2A0A075B649 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav13-2A0A075B649 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-2A0A075B649 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-2A0A075B649 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-2A0A075B649 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-2A0A075B649 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav13-2A0A075B649 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13-2A0A075B649 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13-2A0A075B649 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13-2A0A075B649 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13-2A0A075B649 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Gm27502-201ENSMUST00000183495 199 ntBASIC13.54□□□□□ -0.24
Trav13-2A0A075B649 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms