Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trav10nA0A075B622 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav10nA0A075B622 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav10nA0A075B622 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trav10nA0A075B622 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav10nA0A075B622 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav10nA0A075B622 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.01■□□□□ 0.47
Trav10nA0A075B622 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav10nA0A075B622 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav10nA0A075B622 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav10nA0A075B622 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav10nA0A075B622 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav10nA0A075B622 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav10nA0A075B622 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav10nA0A075B622 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav10nA0A075B622 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav10nA0A075B622 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav10nA0A075B622 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav10nA0A075B622 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav10nA0A075B622 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav10nA0A075B622 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav10nA0A075B622 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Gm14117-201ENSMUST00000122417 843 ntBASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav10nA0A075B622 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Rps24-207ENSMUST00000224568 714 ntBASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav10nA0A075B622 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav10nA0A075B622 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav10nA0A075B622 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav10nA0A075B622 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav10nA0A075B622 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav10nA0A075B622 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav10nA0A075B622 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav10nA0A075B622 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav10nA0A075B622 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Gm45102-201ENSMUST00000207427 857 ntBASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav10nA0A075B622 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms