Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16d-dv11A0A075B617 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16d-dv11A0A075B617 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav16d-dv11A0A075B617 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16d-dv11A0A075B617 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16d-dv11A0A075B617 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16d-dv11A0A075B617 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16d-dv11A0A075B617 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.89□□□□□ -0.03
Trav16d-dv11A0A075B617 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16d-dv11A0A075B617 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16d-dv11A0A075B617 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav16d-dv11A0A075B617 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav16d-dv11A0A075B617 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.88□□□□□ -0.03
Trav16d-dv11A0A075B617 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav16d-dv11A0A075B617 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16d-dv11A0A075B617 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16d-dv11A0A075B617 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Trav16d-dv11A0A075B617 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav16d-dv11A0A075B617 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16d-dv11A0A075B617 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav16d-dv11A0A075B617 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16d-dv11A0A075B617 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16d-dv11A0A075B617 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms