Protein–RNA interactions for Protein: A0A075B5W1

Ighv1-50, Immunoglobulin heavy variable 1-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-50A0A075B5W1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-50A0A075B5W1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-50A0A075B5W1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Gm40881-201ENSMUST00000223397 166 ntBASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-50A0A075B5W1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-50A0A075B5W1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-50A0A075B5W1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-50A0A075B5W1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv1-50A0A075B5W1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-50A0A075B5W1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-50A0A075B5W1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv1-50A0A075B5W1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-50A0A075B5W1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Gm15820-201ENSMUST00000201566 728 ntBASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-50A0A075B5W1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-50A0A075B5W1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-50A0A075B5W1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.15■□□□□ 0.02
Ighv1-50A0A075B5W1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-50A0A075B5W1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-50A0A075B5W1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ighv1-50A0A075B5W1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-50A0A075B5W1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv1-50A0A075B5W1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv1-50A0A075B5W1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv1-50A0A075B5W1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-50A0A075B5W1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-50A0A075B5W1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-50A0A075B5W1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-50A0A075B5W1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-50A0A075B5W1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-50A0A075B5W1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-50A0A075B5W1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv1-50A0A075B5W1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms