Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trbv4A0A075B5I2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv4A0A075B5I2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.44■□□□□ 0.86
Trbv4A0A075B5I2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv4A0A075B5I2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv4A0A075B5I2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Gm7417-201ENSMUST00000192950 473 ntBASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.41■□□□□ 0.86
Trbv4A0A075B5I2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv4A0A075B5I2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.4■□□□□ 0.86
Trbv4A0A075B5I2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv4A0A075B5I2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trbv4A0A075B5I2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trbv4A0A075B5I2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv4A0A075B5I2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv4A0A075B5I2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trbv4A0A075B5I2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.39■□□□□ 0.86
Trbv4A0A075B5I2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv4A0A075B5I2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv4A0A075B5I2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv4A0A075B5I2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbv4A0A075B5I2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbv4A0A075B5I2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trbv4A0A075B5I2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv4A0A075B5I2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Etf1-202ENSMUST00000180351 108 ntBASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trbv4A0A075B5I2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv4A0A075B5I2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv4A0A075B5I2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv4A0A075B5I2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv4A0A075B5I2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv4A0A075B5I2 Gm9959-201ENSMUST00000068277 390 ntBASIC20.36■□□□□ 0.85
Trbv4A0A075B5I2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv4A0A075B5I2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms