Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm15615-201ENSMUST00000118876 198 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm11244-201ENSMUST00000121243 237 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm24398-201ENSMUST00000157870 109 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Mir8093-201ENSMUST00000185043 137 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm28388-201ENSMUST00000186262 437 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm5982-201ENSMUST00000196234 512 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm19009-201ENSMUST00000223072 823 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.1□□□□□ -0.63
Cpne6Q9Z140 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cpne6Q9Z140 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Gm7741-201ENSMUST00000181445 989 ntBASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Gm37028-201ENSMUST00000194276 107 ntBASIC11.09□□□□□ -0.63
Cpne6Q9Z140 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.09□□□□□ -0.63
Cpne6Q9Z140 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Gm23680-201ENSMUST00000083162 164 ntBASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpne6Q9Z140 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Cpne6Q9Z140 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpne6Q9Z140 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cpne6Q9Z140 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms